Scientific publications from the BONUS INSPIRE Project

  1. Andersen, N.G., Chabot, D. and Couturier C.S. 2016 Modelling gastric evacuation in gadoids feeding on crustaceans. Journal of Fish Biology 88: 1886-1903

  2. Arula, T., Laur, K., Simm, M. and Ojaveer, H. 2015. Dual impact of temperature on growth and mortality of marine fish larvae in a shallow estuarine habitat. Estuarine, Coastal and Shelf Science, 167: 326-335

  3. Arula, T., Raid, T., Simm, M. and Ojaveer, H. 2016. Temperature-driven changes in early life-history stages influence the Gulf of Riga spring spawning herring (Clupea harengus m.) recruitment abundance. Hydrobiologia 767: 125-135

  4. Bartolino, V., Tian, H., Bergström, U., Jounela, P., Aro, E., Dieterich, C., Meier, H.E.M., Cardinale, M., Bland, B. and Casini, M. 2017. Spatio-temporal dynamics of a fish predator: Density-dependent and hydrographic effects on Baltic Sea cod population. PLoS ONE 12(2): e0172004

  5. Bauer, B., Meier, H. E. M., Casini, M., Hoff, A., Margonski, P., Orio, A., Saraiva, S., Steenbeek, J. and Tomczak, M. T. Reducing eutrophication increases spatial extent of communities supporting commercial fisheries: a model case study. ICES Journal of Marine Science.

  6. Bekkevold, D., Gross, R., Arula, T., Helyar, S.J. and Ojaveer, H. 2016. Outlier Loci Detect Intraspecific Biodiversity amongst Spring and Autumn Spawning Herring across Local Scales. PLoS ONE 11(4): e0148499

  7. Berndt, K. H. 2016. Fishing the gene pool: Genetic structure, admixture and behavioural complexity in fisheries management. PhD Thesis. Department of Biology, Lund University

  8. Casini, M., Käll, F., Hansson, M., Plikshs, M., Baranova, T., Karlsson, O.,  Lundström, K., Neuenfeldt, S., Gardmark, A. and Hjelm, J. 2016. Hypoxic areas, density-dependence and food limitation drive the body condition of a heavily exploited marine fish predator. Royal Society Open Science 3: 160416

  9. Casini, M., Käll, F. and Hjelm, J. 2015. Changes in the body condition of the Eastern Baltic cod - potential explanations. Working document for ICES WKBALTCOD
    In: ICES. 2015. Report of the Benchmark Workshop on Baltic Cod Stocks, 2–6 March 2015, Rostock, Germany. ICES CM 2015/ACOM:35

  10. Casini, M., Tian, H. Hansson, M., Grygiel, W., Strods, G., Statkus, R., Sepp, E., Gröhsler, T., Orio, A., and Larson, N. Spatio-temporal dynamics and behavioural ecology of a “demersal” fish population as detected using research survey pelagic trawl catches: the Eastern Baltic Sea cod (Gadus morhua). ICES Journal of Marine Science, doi:10.1093/icesjms/fsz016

  11. Eero, M., Hinrichsen, H-H., Hjelm, J., Huwer, B., Hüssy, K., Köster, F.W., Margonski, P., Plikshs, M., Storr-Paulsen, M. and Zimmermann, C. 2019. Designing spawning closures can be complicated: Experience from cod in the Baltic Sea. Ocean and Coastal Management 169: 129-136

  12. Eero, M., Hjelm, J., Behrens, J., Buchmann, K., Cardinale, M., Casini, M., Gasyukov, P., Holmgren, N., Horbowy, J., Hüssy, K., Kirkegaard, E., Kornilovs, G., Krumme, U., Köster, F. W., Oeberst, R., Plikshs, M., Radtke, K., Raid, T., Schmidt, J., Tomczak, M. T., Vinther, M., Zimmermann, C. and Storr-Paulsen, M. 2015. Eastern Baltic cod in distress: biological changes and challenges for stock assessment. ICES Journal of Marine Science

  13. Einberg, H., Klais, R., Rubene, G., Kornilovs, G., Putnis, I., and Ojaveer, H. Multidecadal dynamics of the Arctic copepod Limnocalanus macrurus in relation to environmental variability in the Baltic Sea. ICES Journal of Marine Science, doi:10.1093/icesjms/fsz101

  14. Frelat, R., Orio, A., Casini, M., Lehmann, A., Merigot, B., Otto, S. A., Sguotti, C. and Möllmann, C. A three-dimensional view on biodiversity changes: spatial, temporal, and functional perspectives on fish communities in the Baltic Sea. ICES Journal of Marine Science, doi:10.1093/icesjms/fsy027

  15. Griffiths, J.R., Kadin, M., Nascimento, F.J.A, Tamelander, T., Törnroos, A., Bonaglia, S., Bonsdorff, E., Brüchert, V., Gårdmark, A., Järnström, M., Kotta, J., Lindegren, M., Nordström, M.C., Norkko, A., Olsson, J., Weigel,B., Žydelis, R., Blenckner, T., Niiranen, S. and Winder, M. 2017. The importance of benthic-pelagic coupling for marine ecosystem functioning in a changing world. Global Change Biology,

  16. Hinrichsen, H.-H., Lehmann, A., Petereit, C. Nissling, A., Ustups, D., Bergström, U. and Hüssy, K. 2016. Spawning areas of eastern Baltic cod revisited: Using hydrodynamic modelling to reveal spawning habitat suitability, egg survival probability, and connectivity patterns. Progress in Oceanography

  17. Hinrichsen, H.-H., Petereit, C., Nissling, A., Wallin, I., Ustups, D. and Florin, A.-B. Survival and dispersal variability of pelagic eggs and yolk-sac larvae of central and eastern baltic flounder (Platichthys flesus): application of biophysical models. ICES Journal of Marine Science, doi:10.1093/icesjms/fsw163

  18. Hinrichsen, H.-H., Petereit C., von Dewitz B., Haslob H., Ustups D., Florin A.-B. and Nissling A. 2018. Biophysical modeling of survival and dispersal of Central and Eastern Baltic Sea flounder (Platichthys flesus) larvae. Journal of Sea Research 142: 11-20

  19. Hinrichsen, H.-H., von Dewitz, B., Dierking, J., Haslob, H., Makarchouk, A., Petereit, C. and Voss, R. 2016 Oxygen depletion in coastal seas and the effective spawning stock biomass of an exploited fish species. R. Soc. open sci. 3: 150338

  20. Hinrichsen, H.-H., von Dewitz, B., Lehmann, A., Bergström, U. and Hüssy, K. 2017. Spatio-temporal dynamics of cod nursery areas in the Baltic Sea. Progress in Oceanography 155: 28-40

  21. Horbovy, J. 2016. Effects of varying natural mortality and selectivity on the assessment of eastern Baltic cod (Gadus morhua Linnaeus, 1758) stock. Journal of Applied Ichtyology

  22. Horbowy, J. and Luzeńczyk, A. 2015. Cod in the eastern Baltic - assessment with stock-production models. Working document for ICES WKBALCOD . In: ICES. 2015. Report of the Benchmark Workshop on Baltic Cod Stocks, 2-6 March 2015, Rostock, Germany. ICES CM 2015/ACOM:35

  23. Horbowy, J. and Luzenczyk, A. 2016. Effects of multispecies and density dependent factors on MSY reference points: Example of the Baltic Sea sprat. Canadian Journal of Fisheries and Aquatic Sciences, doi:10.1139/cjfas-2016-0220

  24. Horbowy, J. and Podolska, M. 2015. Does parasitic infection effect natural mortality of cod? Working document for ICES WKBALCOD. In: ICES. 2015. Report of the Benchmark Workshop on BalticCod Stocks, 2-6 March 2015, Rostock, Germany. ICES CM 2015/ACOM:35

  25. Horbowy, J., Podolska, M. and Nadolna-Ałtyn, K. 2016. Increasing occurrence of anisakid nematodes in the liver of cod (Gadus morhua) from the Baltic Sea: Does infection affect the condition andmortality of fish? Fisheries Research 179: 98-103

  26. Huwer, B., Hinrichsen, H.-H., Hüssy, K. and Eero, M. Connectivity of larval cod in the transition area between North Sea and Baltic Sea and potential implications for fisheries management. ICES Journal of Marine Science, doi: 10.1093/icesjms/fsw043

  27. Hüssy, K., Eero, M. and Radtke, K. 2018.  Faster or slower: has growth of eastern Baltic cod changed? Marine Biology Research,

  28. Hüssy, K., Gröger, J., Heidemann, F., Hinrichsen, H.-H. and Marohn, L. 2015. Slave to the rhythm: seasonal signals in otolith microchemistry reveal age of eastern Baltic cod (Gadus morhua). ICES Journal of Marine Science

  29. Hüssy, K., Hinrichsen, H.-H., Eero, M., Mosegaard, H., Hemmer-Hansen, J., Lehmann, A. and Lundgaard, L.S. 2015 Spatio-temporal trends in stock mixing of eastern and western Baltic cod in the Arkona Basin and the implications for recruitment. ICES Journal of Marine Science

  30. Jacobson, P., Gardmark, A., Östergren, J., Casini, M. and Huss, M. 2018. Size-dependent prey availability affects diet and performance of predatory fish at sea: a case study of Atlantic salmon. Ecosphere 9(1):e02081.

  31. Klais, R., Lehtiniemi, M., Rubene, G., Semenova, A., Margonski, P., Ikauniece, A., Simm, M., Põllumäe, A., Grinienė, E., Mäkinen, K. and Ojaveer, H. Comparison of spatial and temporal variability of zooplankton in a temperate  semi-enclosed sea: implications for monitoring design and long-term studies. Journal of Plankton Research, doi:10.1093/plankt/fbw022

  32. Kotterba, P., Moll, D., Hammer, C., Peck M.A., Oesterwind, D. and Polte, P. 2017. Predation on Atlantic herring (Clupea harengus) eggs by the resident predator community in coastal transitional waters. Limnology and Oceanography

  33. Kotterba, P., Moll, D., von Nordheim, L., Peck, M.A., Oesterwind, D. and Polte, P. 2017. Predation on larval Atlantic herring (Clupea harengus) in inshore waters of the Baltic Sea. Estuarine. Coastal and Shelf Science 198: 1-11

  34. Lehmann, A., Hinrichsen, H-H., Getzlaff, K. and Myrberg, K. 2014. Quantifying the heterogeneity of hypoxic and anoxic areas in the Baltic Sea by a simplified coupled hydrodynamic-oxygen consumption model approach. Journal of Marine Systems 134: 20-28.

  35. MacKenzie, B.R, and Ojaveer, H. Evidence from the past: exploitation as cause of commercial extinction of autumn-spawning herring in the Gulf of Riga, Baltic Sea. ICES Journal of Marine Science

  36. Moll, D., Kotterba, P., Jochum, K.P., von Nordheim, L. and Polte, P. 2019 Elemental Inventory in Fish Otoliths Reflects Natal Origin of Atlantic Herring (Clupea harengus) From Baltic Sea Juvenile Areas. Front. Mar. Sci. 6:191.
    doi: 10.3389/fmars.2019.00191

  37. Moll, D., Kotterba, P., von Nordheim, L. and Polte, P. 2017. Storm-induced Atlantic herring (Clupea harengus) egg mortality in Baltic Sea inshore spawning areas. Estuaries and Coasts, DOI 10.1007/s12237-017-0259-5

  38. Momigliano, P., Jokinen, H., Calboli, F., Aro, E. and Merilä, J. 2019. Cryptic temporal changes in stock composition explain the decline of a flounder (Platichthys spp.) assemblage. Evolutionary Applications 1–11; DOI: 10.1111/eva.12738

  39. Nissling, A. and Larsson, R. 2018. Population specific sperm production in European flounder Platichthys flesus: Adaptation to salinity at spawning. Journal of Fish Biology 93: 47–52

  40. Nissling, A., Nyberg, S. and Petereit, C. 2017. Egg buoyancy of flounder, Platichthys flesus, in the Baltic Sea - adaptation to salinity and implications for egg survival. Fisheries Research 191: 179-189

  41. Nyberg, S. 2015. Egg buoyancy and survival probabilities of the Baltic flounder (Platichtys flesus); differences between spawning areas and interannual variation in conditions for reproduction. 2015. Bachelor thesis in biology, Biology Education Centre, Uppsala university (supervisor Anders Nissling; assistant supervisor Christoph Petereit)

  42. Ojaveer, H., Lankov, A., Raid, T., Põllumäe, A. and Klais, R. Selecting for three copepods – feeding of sprat and herring in the Baltic Sea. ICES Journal of Marine Science.

  43. Ojaveer, H., Lankov, A., Teder, M., Simm, M. and Klais, R. 2016. Feeding patterns of dominating small pelagic fish in the Gulf of Riga, Baltic Sea. Hydrobiologia

  44. Ojaveer, H., Neuenfeldt, S., Dierking, J., Eek, L., Haldin, J., Martin, G., Märtin, K., Peterson, K. and Valanko, S. Sustainable use of Baltic Sea resources. ICES Journal of Marine Science, doi:10.1093/icesjms/fsy133

  45. Ojaveer, H., Tomkiewicz, J., Arula, T. and Klais, R. 2015. Female ovarian abnormalities and reproductive failure of autumn-spawning herring (Clupea harengus membras) in the Baltic Sea. ICES Journal of Marine Science, 72: 2332-2340

  46. Orio, A. 2105.  Understanding the spatio-temporal dynamics of demersal fish species in the Baltic Sea. Aqua Introductory Research Essay 2015:1 Department of Aquatic Resources. Swedish University of Agricultural Sciences, Drottningholm Lysekil Öregrund. 29 p.

  47. Orio, A., Bergström, U., Casini, M., Erlandsson, M., Eschbaum, R., Hüssy, K., Lehmann, A., Lozys, L., Ustups, D. and Florin, A-B. 2017. Characterizing and predicting the distribution of Baltic Sea flounder (Platichthys flesus) during the spawning season. Journal of Sea Research

  48. Orio, A., Bergström, U., Florin, A-B., Lehmann, A., Šics, I. and Casini, M. 2019. Spatial contraction of demersal fish populations in a large marine ecosystem. Journal of Biogeography, DOI: 10.1111/jbi.13510

  49. Orio, A., Florin, A.-B., Bergström, U.,  Šics, I., Baranova, T. and Casini, M. 2017. Modelling indices of abundance and size-based indicators of cod and flounder stocks in the Baltic Sea using newly standardized trawl survey data. ICES Journal of Marine Science, doi:10.1093/icesjms/fsx005.

  50. Otto, S.A., Kadin, M., Casini, M., Torrese, M.A. and Blenckner, T. 2017. A quantitative framework for selecting and validating food web indicators. Ecological Indicators

  51. Polte, P., Kotterba, P., Moll, D. and von Nordheim, L. 2017. Ontogenetic loops in habitat use highlight the importance of littoral habitats for early life-stages of oceanic fishes in temperate waters. Scientific Reports 4:42709

  52. Raid, T., Arula, T., Kaljuste, O., Sepp, E., Järv, L., Hallang, A., Shpilev, H. and Lankov, A. 2015. Dynamics of the commercial fishery in the Baltic Sea: What are the driving forces? In: Soares, Dejhalla & Pavleti (Eds) Towards Green Marine Technology and Transport – Guedes Soares. Taylor & Francis Group, London, pp. 897-906

  53. Raid, T., Järv, L., Pönni, J. and Raitaniemi, J. (2018). Main drivers of herring fishery in the two neighboring gulfs of the Northern Baltic Sea. Maritime Transportation and Harvesting of Sea Resources, 2: 17th International Congress of the International Maritime Association of the Mediterranean, Lisbon, 9-11 October 2017. Ed. Guedes Soares, C.; Teixeira, A.P. Taylor and Francis, Boca, Raton, London, New York, Leiden: 1267-1274

  54. Raid, T., Järv, L., Pönni, J., Raitaniemi, J. and Kornilovs, G. 2016. Central Baltic herring stock: What does the assessment of combined stock say about the status of its components? In: Guedes Soares,C.  & Santos, T.A. (Eds). Maritime Technology and Engineering. Taylor & Francis Group, London: 961-966. ISBN 978-1-138-03000-8

  55. Ross, S.D., Andreasen, H. and Andersen, N.G. 2016. An important step towards accurate estimation of diet composition and consumption rates for the harbor porpoise (Phocoena phocoena). Marine mammal science 32: 1491-1500

  56. Svecovs, F., Ozeraja, O., Fettere, M., Strods, G. and Vingovatova, A. 2016. Baltic sprat fishery, stock assessment and prediction. Marine Technology and Engineering 3 – Guedes Soares & Santos (Eds), pp. 973-978

  57. Svedäng, H. and Hornborg, S. 2017. Historic changes in length distributions of three Baltic cod (Gadus morhua) stocks: Evidence of growth retardation. Ecology and Evolution.

  58. Torres, M.A., Casini, M., Huss, M., Otto, S.A., Kadin, M. and Gårdmark, A. 2017. Pelagic food-web indicators accounting for species interactions respond to multiple pressures. Ecological Indicators 77: 67-79

  59. Ustups, D., Bergström, U., Florin, AB., Kruze, E., Zilniece, D., Elferts, D., Knospina, E. and Uzars, D. 2015. Diet overlap between juvenile flatfish and the invasive round goby in the central Baltic Sea. Journal of Sea Research 

  60. van Deurs, M., Persson, A., Lindegren, M., Jacobsen, C., Neuenfeldt, S., Jørgensen, C. and Nilsson, A.P. 2016. Marine ecosystem connectivity mediated by migrant–resident interactions and the concomitant cross-system flux of lipids. Ecology and Evolution, doi: 10.1002/ece3.2167

  61. von Dewitz, B., Tamm, S., Höflich, K., Voss, R. and Hinrichsen, H-H. 2018. Use of existing hydrographic infrastructure to forecast the environmental spawning conditions for Eastern Baltic cod. PLoS ONE 13(5): e0196477

  62. von Nordheim, L., Kotterba, P., Moll, D. and Polte, P. 2017. Impact of spawning substrate complexity on egg survival of Atlantic herring (Clupea harengus, L.) in the Baltic Sea. Estuaries and Coasts

  63. Yletyinen, J., Hentati-Sundberg, J., Blenckner, T. and Bodin, Ö. 2018. Fishing strategy diversification and fishers' ecological dependency. Ecology and Society 23(3):28

  64. Wallin, Isa 2016. Opportunities for hybridization between two sympatric flounder (Platichtys flesus) ecotypes in the Baltic Sea. Master thesis in biology, Biology Education Centre, Uppsala university (supervisor Anders Nissling)
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